Package: hestia
Title: Bayesian Compartmental Infection Models from Individual Outcomes
Version: 0.1.0
Authors@R: 
    c(person("Claire Perrin", "Smith", email = "clairesmith6995@gmail.com",
             role = c("aut", "cre"),
             comment = c(ORCID = "0000-0003-1069-9460")),
      person("Jack", "Goodall", email = "jackwgoodall@hotmail.com",
             role = "aut"))
Description: Fit Bayesian compartmental infection models (such as
        susceptible-infected-recovered and multi-compartment hidden
        Markov variants) from individual-level outcome data. Models are
        composed from infection-process and observation-process
        components and fit using Stan via 'rstan'.
License: MIT + file LICENSE
Encoding: UTF-8
Language: en-US
Roxygen: list(markdown = TRUE, roclets = c("collate", "namespace",
        "rd", "roxyglobals::global_roclet"))
RoxygenNote: 7.3.3
Biarch: true
Depends: R (>= 4.1.0)
Imports: checkmate, dplyr, flexstanr (>= 0.2.0), methods, posterior,
        Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstan (>= 2.18.1),
        rstantools (>= 2.5.0), stats, tidyr
LinkingTo: BH (>= 1.66.0), Rcpp (>= 0.12.0), RcppEigen (>= 0.3.3.3.0),
        RcppParallel (>= 5.0.1), rstan (>= 2.18.1), StanHeaders (>=
        2.18.0)
SystemRequirements: GNU make
Suggests: bayesplot, ggplot2, knitr, lintr, patchwork, pkgload,
        rmarkdown, roxygen2, roxyglobals, spelling, testthat (>=
        3.0.0), withr
VignetteBuilder: knitr
Config/testthat/edition: 3
URL: https://accidda.github.io/hestia/,
        https://github.com/ACCIDDA/hestia
BugReports: https://github.com/ACCIDDA/hestia/issues
LazyData: true
LazyDataCompression: xz
Config/roxyglobals/filename: globals.R
Config/roxyglobals/unique: FALSE
Config/pak/sysreqs: cmake make libicu-dev
Repository: https://accidda.r-universe.dev
Date/Publication: 2026-10-24 13:35:29 UTC
RemoteUrl: https://github.com/accidda/hestia
RemoteRef: HEAD
RemoteSha: 914b09554b7d4628859f7335ac6f318edb8d7586
NeedsCompilation: yes
Packaged: 2026-10-24 14:57:42 UTC; root
Author: Claire Perrin Smith [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-1069-9460>),
  Jack Goodall [aut]
Maintainer: Claire Perrin Smith <clairesmith6995@gmail.com>